Detailed information of HOLI00001.G51580 in Hydra oligactis

Genomic Location: HOLI00001:3291834...3292550
NR annotation: WP_042127799.1, response regulator transcription factor [Pseudomonas japonica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q04803Transcriptional activator protein PfeR OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=pfeR PE=3 SV=1
P35163Transcriptional regulatory protein ResD OS=Bacillus subtilis (strain 168) OX=224308 GN=resD PE=1 SV=2
A0A0H3GGB5Transcriptional regulatory protein CpxR OS=Klebsiella pneumoniae subsp. pneumoniae (strain HS11286) OX=1125630 GN=cpxR PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00072Response_regResponse regulator receiver domainDomainInterproscan
PF00486Trans_reg_CTranscriptional regulatory protein, C terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR001867DomainOmpR/PhoB-type DNA-binding domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR039420FamilyTranscriptional regulatory protein WalR-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48111REGULATOR OF RPOSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000156Molecular Functionphosphorelay response regulator activityInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0032993Cellular Componentprotein-DNA complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19610pfeR, pirR; two-component system, OmpR family, response regulator PfeR-Two-component systemko02022deepkoala

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