Gene detail

Detailed information of HOLI00001.G51588 in Hydra oligactis

Genomic Location: HOLI00001:3301443...3302267
NR annotation: WP_175652396.1, tRNA 2-thiocytidine(32) synthetase TtcA [Pseudomonas sp. Marseille-P9899]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
B1J1K3	tRNA-cytidine(32) 2-sulfurtransferase OS=Pseudomonas putida (strain W619) OX=390235 GN=ttcA PE=3 SV=1
B0KT32	tRNA-cytidine(32) 2-sulfurtransferase OS=Pseudomonas putida (strain GB-1) OX=76869 GN=ttcA PE=3 SV=1
Q1IDN2	tRNA-cytidine(32) 2-sulfurtransferase OS=Pseudomonas entomophila (strain L48) OX=384676 GN=ttcA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01171	ATP_bind_3	PP-loop family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011063	Domain	tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR035107	Family	tRNA thiolation protein, TtcA/Ctu1 type	Interproscan
IPR012089	Family	tRNA-cytidine(32) 2-sulfurtransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43686	SULFURTRANSFERASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008033	Biological Process	tRNA processing	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14058	ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA	-	Transfer RNA biogenesis	ko03016	deepkoala