Gene detail

Detailed information of HOLI00001.G51636 in Hydra oligactis

Genomic Location: HOLI00001:3362581...3364551
NR annotation: WP_042122768.1, methionine--tRNA ligase [Pseudomonas japonica]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
B1J1D1	Methionine--tRNA ligase OS=Pseudomonas putida (strain W619) OX=390235 GN=metG PE=3 SV=1
A5VZI8	Methionine--tRNA ligase OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1) OX=351746 GN=metG PE=3 SV=2
B0KUD8	Methionine--tRNA ligase OS=Pseudomonas putida (strain GB-1) OX=76869 GN=metG PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19303	Anticodon_3	Anticodon binding domain of methionyl tRNA ligase	Domain	Interproscan
PF09334	tRNA-synt_1g	tRNA synthetases class I (M)	Family	Interproscan
PF01588	tRNA_bind	Putative tRNA binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014758	Family	Methionyl-tRNA synthetase	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR029038	Homologous_superfamily	Methionyl-tRNA synthetase, Zn-domain	Interproscan
IPR041872	Domain	Methionyl-tRNA synthetase, anticodon-binding domain	Interproscan
IPR004495	Domain	Methionyl-tRNA synthetase, beta subunit, C-terminal	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR033911	Domain	Methioninyl-tRNA synthetase core domain	Interproscan
IPR009080	Homologous_superfamily	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	Interproscan
IPR002547	Domain	tRNA-binding domain	Interproscan
IPR015413	Domain	Methionyl/Leucyl tRNA synthetase	Interproscan
IPR023458	Family	Methionine-tRNA ligase, type 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45765	METHIONINE--TRNA LIGASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004825	Molecular Function	methionine-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006431	Biological Process	methionyl-tRNA aminoacylation	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01874	MARS, metG; methionyl-tRNA synthetase	EC:6.1.1.10	Transfer RNA biogenesis	ko03016	deepkoala