Gene detail

Detailed information of HOLI00001.G51692 in Hydra oligactis

Genomic Location: HOLI00001:3447384...3448010
NR annotation: WP_249684267.1, ribonuclease III [Pseudomonas sp. RC2C2]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q4KHT1	Ribonuclease 3 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=rnc PE=3 SV=2
B1J4E0	Ribonuclease 3 OS=Pseudomonas putida (strain W619) OX=390235 GN=rnc PE=3 SV=1
B0KV27	Ribonuclease 3 OS=Pseudomonas putida (strain GB-1) OX=76869 GN=rnc PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00035	dsrm	Double-stranded RNA binding motif	Domain	Interproscan
PF14622	Ribonucleas_3_3	Ribonuclease-III-like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011907	Family	Ribonuclease III	Interproscan
IPR014720	Domain	Double-stranded RNA-binding domain	Interproscan
IPR036389	Homologous_superfamily	Ribonuclease III, endonuclease domain superfamily	Interproscan
IPR000999	Domain	Ribonuclease III domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11207	RIBONUCLEASE III	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003725	Molecular Function	double-stranded RNA binding	Interproscan
GO:0004525	Molecular Function	ribonuclease III activity	Interproscan
GO:0006396	Biological Process	RNA processing	Interproscan
GO:0010468	Biological Process	regulation of gene expression	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0006364	Biological Process	rRNA processing	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03685	rnc, DROSHA, RNT1; ribonuclease III	EC:3.1.26.3	Chromosome and associated proteins	ko03036	deepkoala