Gene detail

Detailed information of HOLI00001.G51768 in Hydra oligactis

Genomic Location: HOLI00001:3533910...3535274
NR annotation: WP_095154768.1, 3-carboxy-cis,cis-muconate cycloisomerase [Pseudomonas sp. Irchel 3E13]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9I6Q8	3-carboxy-cis,cis-muconate cycloisomerase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=pcaB PE=3 SV=1
P32427	3-carboxy-cis,cis-muconate cycloisomerase (Fragment) OS=Pseudomonas putida OX=303 GN=pcaB PE=1 SV=3
O31385	3-carboxy-cis,cis-muconate cycloisomerase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=pcaB PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10397	ADSL_C	Adenylosuccinate lyase C-terminus	Domain	Interproscan
PF00206	Lyase_1	Lyase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019468	Domain	Adenylosuccinate lyase C-terminal	Interproscan
IPR022761	Domain	Fumarate lyase, N-terminal	Interproscan
IPR008948	Homologous_superfamily	L-Aspartase-like	Interproscan
IPR000362	Family	Fumarate lyase family	Interproscan
IPR020557	Conserved_site	Fumarate lyase, conserved site	Interproscan
IPR012789	Family	3-carboxy-cis,cis-muconate cycloisomerase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43172	ADENYLOSUCCINATE LYASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0019619	Biological Process	3,4-dihydroxybenzoate catabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01857	pcaB; 3-carboxy-cis,cis-muconate cycloisomerase	EC:5.5.1.2	Benzoate degradation	ko00362	deepkoala