Gene detail

Detailed information of HOLI00001.G51770 in Hydra oligactis

Genomic Location: HOLI00001:3536732...3538692
NR annotation: CEE28928.1, beta-ketoadipyl CoA thiolase (modular protein) [Xanthomonas citri pv. citri]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q51956	Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida OX=303 GN=pcaF PE=3 SV=1
Q9I6R0	Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=pcaF PE=1 SV=1
Q8VPF1	Beta-ketoadipyl-CoA thiolase OS=Pseudomonas knackmussii (strain DSM 6978 / CCUG 54928 / LMG 23759 / B13) OX=1301098 GN=pcaF PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01144	CoA_trans	Coenzyme A transferase	Domain	Interproscan
PF00108	Thiolase_N	Thiolase, N-terminal domain	Domain	Interproscan
PF02803	Thiolase_C	Thiolase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037171	Homologous_superfamily	NagB/RpiA transferase-like	Interproscan
IPR016039	Homologous_superfamily	Thiolase-like	Interproscan
IPR002155	Family	Thiolase	Interproscan
IPR020615	Active_site	Thiolase, acyl-enzyme intermediate active site	Interproscan
IPR004165	Family	Coenzyme A transferase family I	Interproscan
IPR012793	Family	Beta-ketoadipyl CoA thiolase	Interproscan
IPR050215	Family	Thiolase-like superfamily, Thiolase	Interproscan
IPR020616	Domain	Thiolase, N-terminal	Interproscan
IPR020617	Domain	Thiolase, C-terminal	Interproscan
IPR020610	Active_site	Thiolase, active site	Interproscan
IPR020613	Conserved_site	Thiolase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43853	3-KETOACYL-COA THIOLASE, PEROXISOMAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016746	Molecular Function	acyltransferase activity	Interproscan
GO:0016747	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan
GO:0008410	Molecular Function	CoA-transferase activity	Interproscan
GO:0019619	Biological Process	3,4-dihydroxybenzoate catabolic process	Interproscan
GO:0003988	Molecular Function	acetyl-CoA C-acyltransferase activity	Interproscan
GO:0006635	Biological Process	fatty acid beta-oxidation	Interproscan
GO:0010124	Biological Process	phenylacetate catabolic process	Interproscan