Detailed information of HOLI00001.G51815 in Hydra oligactis

Genomic Location: HOLI00001:3590464...3591201
NR annotation: WP_009395556.1, MULTISPECIES: two-component system response regulator ColR [Pseudomonas]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
I1WSZ4Transcriptional activator protein IrlR OS=Burkholderia pseudomallei (strain 1026b) OX=884204 GN=irlR PE=3 SV=1
P0DMK7Transcriptional activator protein IrlR OS=Burkholderia pseudomallei (strain K96243) OX=272560 GN=irlR PE=3 SV=1
Q44006Transcriptional activator protein CzcR OS=Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) OX=266264 GN=czcR PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00486Trans_reg_CTranscriptional regulatory protein, C terminalDomainInterproscan
PF00072Response_regResponse regulator receiver domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039420FamilyTranscriptional regulatory protein WalR-likeInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR001867DomainOmpR/PhoB-type DNA-binding domainInterproscan
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48111REGULATOR OF RPOSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000156Molecular Functionphosphorelay response regulator activityInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0032993Cellular Componentprotein-DNA complexInterproscan
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

TOP