Gene detail

Detailed information of HOLI00001.G51852 in Hydra oligactis

Genomic Location: HOLI00001:3635353...3635772
NR annotation: WP_262128193.1, ClpXP protease specificity-enhancing factor [Pseudomonas sp. 5P_5.1_Bac1]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P0AFZ4	Stringent starvation protein B OS=Escherichia coli O157:H7 OX=83334 GN=sspB PE=3 SV=1
P0AFZ3	Stringent starvation protein B OS=Escherichia coli (strain K12) OX=83333 GN=sspB PE=1 SV=1
Q83Q08	Stringent starvation protein B OS=Shigella flexneri OX=623 GN=sspB PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04386	SspB	Stringent starvation protein B	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007481	Family	Stringent starvation protein B	Interproscan
IPR036760	Homologous_superfamily	SspB-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37486	STRINGENT STARVATION PROTEIN B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0045732	Biological Process	positive regulation of protein catabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03600	sspB; stringent starvation protein B	-	Transcription machinery	ko03021	deepkoala