Detailed information of HOLI00001.G51861 in Hydra oligactis

Genomic Location: HOLI00001:3641668...3644192
NR annotation: HCN46737.1, tryptophan--tRNA ligase [Pseudomonas sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q88NA1Tryptophan--tRNA ligase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=trpS PE=3 SV=1
Q87WW4Tryptophan--tRNA ligase OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=trpS PE=3 SV=1
Q9HVX6Tryptophan--tRNA ligase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=trpS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00579tRNA-synt_1btRNA synthetases class I (W and Y)FamilyInterproscan
PF03969AFG1_ATPaseAFG1-like ATPaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002305FamilyAminoacyl-tRNA synthetase, class IcInterproscan
IPR036913Homologous_superfamilyYegP-like superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR024109FamilyTryptophan-tRNA ligase, bacterial-typeInterproscan
IPR005654FamilyATPase, AFG1-likeInterproscan
IPR002306FamilyTryptophan-tRNA ligaseInterproscan
IPR030870FamilyCell division protein ZapEInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12169ATPASE N2BInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004830Molecular Functiontryptophan-tRNA ligase activityInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0006436Biological Processtryptophanyl-tRNA aminoacylationInterproscan
GO:0051301Biological Processcell divisionInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0032153Cellular Componentcell division siteInterproscan

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