Gene detail

Detailed information of HOLI00001.G51900 in Hydra oligactis

Genomic Location: HOLI00001:3685521...3686837
NR annotation: WP_043861007.1, MULTISPECIES: UDP-glucose/GDP-mannose dehydrogenase family protein [Pseudomonas]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q88NC4	GDP-mannose 6-dehydrogenase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=algD PE=3 SV=1
O07299	GDP-mannose 6-dehydrogenase OS=Pseudomonas savastanoi pv. phaseolicola OX=319 GN=algD PE=3 SV=1
P59793	GDP-mannose 6-dehydrogenase OS=Pseudomonas syringae pv. syringae OX=321 GN=algD PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00984	UDPG_MGDP_dh	UDP-glucose/GDP-mannose dehydrogenase family, central domain	Domain	Interproscan
PF03720	UDPG_MGDP_dh_C	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain	Domain	Interproscan
PF03721	UDPG_MGDP_dh_N	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008927	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan
IPR014026	Domain	UDP-glucose/GDP-mannose dehydrogenase, dimerisation	Interproscan
IPR014027	Domain	UDP-glucose/GDP-mannose dehydrogenase, C-terminal	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR036220	Homologous_superfamily	UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily	Interproscan
IPR017476	Family	UDP-glucose/GDP-mannose dehydrogenase	Interproscan
IPR001732	Domain	UDP-glucose/GDP-mannose dehydrogenase, N-terminal	Interproscan
IPR028358	Family	GDP-mannose 6-dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43750	UDP-GLUCOSE 6-DEHYDROGENASE TUAD	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0051287	Molecular Function	NAD binding	Interproscan
GO:0042121	Biological Process	alginic acid biosynthetic process	Interproscan
GO:0047919	Molecular Function	GDP-mannose 6-dehydrogenase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00066	algD; GDP-mannose 6-dehydrogenase	EC:1.1.1.132	Two-component system	ko02020	deepkoala