Detailed information of HOLI00001.G52077 in Hydra oligactis

Genomic Location: HOLI00001:3924885...3928652
NR annotation: HCN46255.1, isoleucine--tRNA ligase [Pseudomonas sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1I4S5Isoleucine--tRNA ligase OS=Pseudomonas entomophila (strain L48) OX=384676 GN=ileS PE=3 SV=1
B1JF83Isoleucine--tRNA ligase OS=Pseudomonas putida (strain W619) OX=390235 GN=ileS PE=3 SV=1
Q88Q92Isoleucine--tRNA ligase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=ileS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00133tRNA-synt_1tRNA synthetases class I (I, L, M and V)DomainInterproscan
PF06827zf-FPG_IleRSZinc finger found in FPG and IleRSDomainInterproscan
PF01252Peptidase_A8Signal peptidase (SPase) IIFamilyInterproscan
PF00254FKBP_CFKBP-type peptidyl-prolyl cis-trans isomeraseDomainInterproscan
PF08264Anticodon_1Anticodon-binding domain of tRNA ligaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046357Homologous_superfamilyPeptidyl-prolyl cis-trans isomerase domain superfamilyInterproscan
IPR002300DomainAminoacyl-tRNA synthetase, class IaInterproscan
IPR009008Homologous_superfamilyValyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainInterproscan
IPR001872FamilyPeptidase A8, signal peptidase IIInterproscan
IPR050081FamilyIsoleucine--tRNA ligaseInterproscan
IPR010663DomainZinc finger, FPG/IleRS-typeInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR002301FamilyIsoleucine-tRNA ligaseInterproscan
IPR001179DomainFKBP-type peptidyl-prolyl cis-trans isomerase domainInterproscan
IPR013155DomainMethionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingInterproscan
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR048261Homologous_superfamilyPPIase chaperone SlpA/SlyD-like, insertion domain superfamilyInterproscan
IPR023585FamilyIsoleucine-tRNA ligase, type 1Interproscan
IPR033708DomainIsoleucyl tRNA synthetase type 1, anticodon-binding domainInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42765SOLEUCYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activityInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004822Molecular Functionisoleucine-tRNA ligase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006428Biological Processisoleucyl-tRNA aminoacylationInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01870IARS, ileS; isoleucyl-tRNA synthetaseEC:6.1.1.5
Transfer RNA biogenesisko03016deepkoala

TOP