Gene detail

Detailed information of HOLI00001.G52131 in Hydra oligactis

Genomic Location: HOLI00001:4003147...4004484
NR annotation: HCN46693.1, carbamoyl-phosphate synthase small subunit [Pseudomonas sp.]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q88DU5	Carbamoyl phosphate synthase small chain OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=carA PE=3 SV=1
Q87WP3	Carbamoyl phosphate synthase small chain OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=carA PE=3 SV=1
P38098	Carbamoyl phosphate synthase small chain OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=carA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00117	GATase	Glutamine amidotransferase class-I	Domain	Interproscan
PF00988	CPSase_sm_chain	Carbamoyl-phosphate synthase small chain, CPSase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017926	Domain	Glutamine amidotransferase	Interproscan
IPR002474	Domain	Carbamoyl-phosphate synthase small subunit, N-terminal domain	Interproscan
IPR035686	Domain	Carbamoyl-phosphate synthase small subunit, GATase1 domain	Interproscan
IPR029062	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR036480	Homologous_superfamily	Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily	Interproscan
IPR006274	Family	Carbamoyl-phosphate synthase, small subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11405	CARBAMOYLTRANSFERASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004088	Molecular Function	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005951	Cellular Component	carbamoyl-phosphate synthase complex	Interproscan
GO:0006526	Biological Process	L-arginine biosynthetic process	Interproscan
GO:0006807	Biological Process	obsolete nitrogen compound metabolic process	Interproscan
GO:0006207	Biological Process	'de novo' pyrimidine nucleobase biosynthetic process	Interproscan
GO:0006541	Biological Process	glutamine metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01956	carA, CPA1; carbamoyl-phosphate synthase small subunit	EC:6.3.5.5	Alanine, aspartate and glutamate metabolism	ko00250	deepkoala