Gene detail

Detailed information of HOLI00001.G52339 in Hydra oligactis

Genomic Location: HOLI00001:4226978...4227580
NR annotation: WP_010220305.1, MULTISPECIES: 50S ribosomal protein L4 [Pseudomonas]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A5VXP8	Large ribosomal subunit protein uL4 OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1) OX=351746 GN=rplD PE=3 SV=1
B0KK68	Large ribosomal subunit protein uL4 OS=Pseudomonas putida (strain GB-1) OX=76869 GN=rplD PE=3 SV=1
Q88QN4	Large ribosomal subunit protein uL4 OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=rplD PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00573	Ribosomal_L4	Ribosomal protein L4/L1 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002136	Family	Large ribosomal subunit protein uL4	Interproscan
IPR013005	Family	Large ribosomal subunit protein uL4-like	Interproscan
IPR023574	Homologous_superfamily	Large ribosomal subunit protein uL4 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10746	50S RIBOSOMAL PROTEIN L4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02926	RP-L4, MRPL4, rplD; large subunit ribosomal protein L4	-	Ribosome	ko03011	deepkoala