Gene detail

Detailed information of HOLI00001.G52341 in Hydra oligactis

Genomic Location: HOLI00001:4228310...4228621
NR annotation: WP_003186070.1, MULTISPECIES: 30S ribosomal protein S10 [Gammaproteobacteria]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q4K532	Small ribosomal subunit protein uS10 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=rpsJ PE=3 SV=1
C3K2X7	Small ribosomal subunit protein uS10 OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=rpsJ PE=3 SV=1
A5VXP6	Small ribosomal subunit protein uS10 OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1) OX=351746 GN=rpsJ PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00338	Ribosomal_S10	Ribosomal protein S10p/S20e	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036838	Homologous_superfamily	Small ribosomal subunit protein uS10 domain superfamily	Interproscan
IPR027486	Domain	Small ribosomal subunit protein uS10 domain	Interproscan
IPR018268	Conserved_site	Small ribosomal subunit protein uS10, conserved site	Interproscan
IPR001848	Family	Small ribosomal subunit protein uS10	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11700	30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0015935	Cellular Component	small ribosomal subunit	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02946	RP-S10, MRPS10, rpsJ; small subunit ribosomal protein S10	-	Ribosome	ko03011	deepkoala