Gene detail

Detailed information of HOLI00001.G52434 in Hydra oligactis

Genomic Location: HOLI00001:4358180...4359094
NR annotation: WP_095156185.1, MULTISPECIES: GGDEF domain-containing protein [unclassified Pseudomonas]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9KKZ4	Diguanylate cyclase VdcA OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=vdcA PE=1 SV=1
Q9HT84	Diguanylate cyclase DgcP OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=dgcP PE=1 SV=1
A0A0H2ZJS2	Diguanylate cyclase DgcP OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=dgcP PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00990	GGDEF	Diguanylate cyclase, GGDEF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050469	Family	Bacterial Diguanylate Cyclase	Interproscan
IPR000160	Domain	GGDEF domain	Interproscan
IPR029787	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45138	REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0043709	Biological Process	cell adhesion involved in single-species biofilm formation	Interproscan
GO:0052621	Molecular Function	diguanylate cyclase activity	Interproscan
GO:1902201	Biological Process	negative regulation of bacterial-type flagellum-dependent cell motility	Interproscan