Gene detail

Detailed information of HOLI00001.G52537 in Hydra oligactis

Genomic Location: HOLI00001:4494120...4495811
NR annotation: WP_075802110.1, choline dehydrogenase [Pseudomonas putida]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A5WA97	Oxygen-dependent choline dehydrogenase OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1) OX=351746 GN=betA PE=3 SV=1
B0KN19	Oxygen-dependent choline dehydrogenase OS=Pseudomonas putida (strain GB-1) OX=76869 GN=betA PE=3 SV=1
Q88CW6	Oxygen-dependent choline dehydrogenase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=betA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00732	GMC_oxred_N	GMC oxidoreductase	Domain	Interproscan
PF05199	GMC_oxred_C	GMC oxidoreductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012132	Family	Glucose-methanol-choline oxidoreductase	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR000172	Domain	Glucose-methanol-choline oxidoreductase, N-terminal	Interproscan
IPR011533	Family	Oxygen-dependent choline dehydrogenase	Interproscan
IPR007867	Domain	Glucose-methanol-choline oxidoreductase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11552	GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0016614	Molecular Function	oxidoreductase activity, acting on CH-OH group of donors	Interproscan
GO:0008812	Molecular Function	choline dehydrogenase activity	Interproscan
GO:0019285	Biological Process	glycine betaine biosynthetic process from choline	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan