Detailed information of HOLI00001.G52572 in Hydra oligactis

Genomic Location: HOLI00001:4547795...4549529
NR annotation: WP_095156330.1, MULTISPECIES: arginine--tRNA ligase [unclassified Pseudomonas]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q88CU1Arginine--tRNA ligase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=argS PE=3 SV=1
A5WAC2Arginine--tRNA ligase OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1) OX=351746 GN=argS PE=3 SV=1
Q1IGB8Arginine--tRNA ligase OS=Pseudomonas entomophila (strain L48) OX=384676 GN=argS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03485Arg_tRNA_synt_NArginyl tRNA synthetase N terminal domainDomainInterproscan
PF05746DALR_1DALR anticodon binding domainDomainInterproscan
PF00750tRNA-synt_1dtRNA synthetases class I (R)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR005148DomainArginyl tRNA synthetase N-terminal domainInterproscan
IPR008909DomainDALR anticodon bindingInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR035684DomainArginyl-tRNA synthetase, catalytic core domainInterproscan
IPR001278FamilyArginine-tRNA ligaseInterproscan
IPR036695Homologous_superfamilyArginyl tRNA synthetase N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11956ARGINYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004814Molecular Functionarginine-tRNA ligase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006420Biological Processarginyl-tRNA aminoacylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01887RARS, argS; arginyl-tRNA synthetaseEC:6.1.1.19
Mitochondrial biogenesisko03029deepkoala

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