Gene detail

Detailed information of HOLI00001.G52577 in Hydra oligactis

Genomic Location: HOLI00001:4552590...4553276
NR annotation: WP_262156350.1, MULTISPECIES: YggS family pyridoxal phosphate-dependent enzyme [unclassified Pseudomonas]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P24562	Pyridoxal phosphate homeostasis protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=PA0394 PE=3 SV=1
Q9KUQ4	Pyridoxal phosphate homeostasis protein OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=VC_0461 PE=3 SV=1
P67082	Pyridoxal phosphate homeostasis protein OS=Escherichia coli O157:H7 OX=83334 GN=yggS PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01168	Ala_racemase_N	Alanine racemase, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011078	Family	Pyridoxal phosphate homeostasis protein	Interproscan
IPR029066	Homologous_superfamily	PLP-binding barrel	Interproscan
IPR001608	Domain	Alanine racemase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10146	PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0005622	Cellular Component	intracellular anatomical structure	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06997	yggS, PROSC; PLP dependent protein	-	Amino acid metabolism	-	deepkoala