Gene detail

Detailed information of HOLI00001.G52687 in Hydra oligactis

Genomic Location: HOLI00001:4680053...4681963
NR annotation: WP_042121055.1, ATP-binding cassette domain-containing protein [Pseudomonas japonica]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P63390	Probable ATP-binding protein YheS OS=Escherichia coli O157:H7 OX=83334 GN=yheS PE=3 SV=1
P63389	Probable ATP-binding protein YheS OS=Escherichia coli (strain K12) OX=83333 GN=yheS PE=1 SV=1
A0A0H2VBH0	Probable ATP-binding protein YheS OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=yheS PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF12848	ABC_tran_Xtn	ABC transporter	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050611	Family	ATP-binding cassette sub-family F member, EF3 subfamily	Interproscan
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR017871	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR032781	Domain	ABC-transporter extension domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19211	ATP-BINDING TRANSPORT PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06158	ABCF3; ATP-binding cassette, subfamily F, member 3	-	Translation factors	ko03012	deepkoala