Detailed information of HOLI00001.G52693 in Hydra oligactis

Genomic Location: HOLI00001:4685873...4689988
NR annotation: MXR32637.1, hydroxymethylbilane synthase [Pseudomonas sp. PICF6]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3K4T0Porphobilinogen deaminase OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=hemC PE=3 SV=1
B0KH05Porphobilinogen deaminase OS=Pseudomonas putida (strain GB-1) OX=76869 GN=hemC PE=3 SV=1
B1J1V2Porphobilinogen deaminase OS=Pseudomonas putida (strain W619) OX=390235 GN=hemC PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07219HemY_NHemY protein N-terminusRepeatInterproscan
PF03900Porphobil_deamCPorphobilinogen deaminase, C-terminal domainDomainInterproscan
PF01379Porphobil_deamPorphobilinogen deaminase, dipyromethane cofactor binding domainDomainInterproscan
PF04375HemXHemX, putative uroporphyrinogen-III C-methyltransferaseFamilyInterproscan
PF02602HEM4Uroporphyrinogen-III synthase HemDFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036803Homologous_superfamilyPorphobilinogen deaminase, C-terminal domain superfamilyInterproscan
IPR000860FamilyPorphobilinogen deaminaseInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR036108Homologous_superfamilyTetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamilyInterproscan
IPR005254FamilyHeme biosynthesis-associated TPR proteinInterproscan
IPR010817DomainHemY, N-terminalInterproscan
IPR022418DomainPorphobilinogen deaminase, C-terminalInterproscan
IPR022417DomainPorphobilinogen deaminase, N-terminalInterproscan
IPR003754DomainTetrapyrrole biosynthesis, uroporphyrinogen III synthaseInterproscan
IPR007470FamilyPutative uroporphyrinogen-III C-methyltransferase HemXInterproscan
IPR022419Binding_sitePorphobilinogen deaminase, dipyrromethane cofactor binding siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11557PORPHOBILINOGEN DEAMINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004418Molecular Functionhydroxymethylbilane synthase activityInterproscan
GO:0033014Biological Processtetrapyrrole biosynthetic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004852Molecular Functionuroporphyrinogen-III synthase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0042168Biological Processheme metabolic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006783Biological Processheme biosynthetic processInterproscan
GO:0018160Biological Processpeptidyl-pyrromethane cofactor linkageInterproscan

TOP