Gene detail

Detailed information of HOLI00001.G52729 in Hydra oligactis

Genomic Location: HOLI00001:4733952...4735340
NR annotation: WP_095159864.1, NorM family multidrug efflux MATE transporter [Pseudomonas sp. Irchel 3E13]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q88CB9	Probable multidrug resistance protein NorM OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=norM PE=3 SV=1
Q88BA2	Probable multidrug resistance protein NorM OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=norM PE=3 SV=1
Q9HTR0	Probable multidrug resistance protein NorM OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=norM PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01554	MatE	MatE	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050222	Family	Multi Antimicrobial Extrusion (MATE)	Interproscan
IPR002528	Family	Multi antimicrobial extrusion protein	Interproscan
IPR048279	Family	Multidrug resistance protein MdtK-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43298	MULTIDRUG RESISTANCE PROTEIN NORM-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0015297	Molecular Function	antiporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0042910	Molecular Function	xenobiotic transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K26939	norM, mdtK; MATE family, multidrug efflux pump	-	Transporters	ko02000	deepkoala