Gene detail

Detailed information of HOLI00001.G52745 in Hydra oligactis

Genomic Location: HOLI00001:4776481...4778595
NR annotation: WP_110973408.1, amino acid adenylation domain-containing protein [Pseudomonas huaxiensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI00001.g52745.t1

ATGAGCAACGCAGGGTGTTGGCGTTTCTCGCGCAGCCGCGTCAGGCCGGTGCGGATAGTGCTTTACGCCGCTACGCCGAAGAGCGCCTGCCCGAGTAACATGCGGCCGCTGCATTACCGGGAGCTGGCACGCATGCCCTGGACAGCCAACGGCAAGGTCGACCGCCGCGCCTTGCTGGCCATTCCGTTGTCGCTTGCCCCGCAGCGTGAGCGCGTGATGCCGGGCGATCCCTTGGAAAGCCGGTTGCTGGCGTTGTGGAGCGAGTTGCTGGAGTTGCCGGAGGGCGATATTTACATCGATGACAGTTTCTTCAATCTCGGCGGGCATTCGATCTTGCTGTCGCGCTTGCTGCTGGCTCTGCATGAGCAGTTCGGGCGCGGGATTTCGATCAATCGCTTCATCGAAGTGCCCACCGTGCAGCGGTTGGCCCAACTGCTCAAAGGCTATGAGGCGGCTGCGGGGGCCATTCACCCACAGGCGCTGGCCGATGCCGAGCGCGAACCTGAGTTGTCGGTGCTGCCAGCCGAGCGTCTGGGGGACGTGCGCAATGTGATGGTCACTGGCGCCAACAGCTTTCTCGGTGTGCATATCGTCGAGGCGTTGCTGGCTTCCGGCGCGAGGGAAGTGGCGTGCCTGGTGCGCCGTGGCGGGGGGCTCTCGGCGCAGGAGCGCTTCGCCCGGGCGGTGGCCGAGAACCGTATCGCAGGTCTGGATTGGCAGCGGGTACGTGTTCTTGAGGCCGACCTGCGAGAGCCACAGTTGGGGCTGTGCGAGGCGGACTACAACGATCTCGACCGCCGCTATGGGGCGGTCGTTCATAACGCGGCGCAGGTCAATCACGTTCTCGATTACCCGGCGCTGGCGGTGGATAACGTCGAGCCACTGTTCGCCTGCCTGCGCCTGTGCGAGGGACAGACCAAGAAGATCCTGAGTTTCATCTCGACGCTCTCCGCCTGCAGTGTCAGGGACGAACAAGGCCGAGTGCTGGAACAGCCTGCGGCGACCAGCCCACCGCTCTACATCCGCAACGGCTACAACCTGAGCAAATGGGTGGCTGAGCGCATTCTGGAGAGAGCACGACAACAGGGCGTGTGGGTGAACCTGATGCGGCCAGGGAACATCACCTTCGATAGCCGCAGCGGCGTCTGTCAGCCACATAAGAACCGTCTGATGCTGATGCTCAAGGGTTCGCTGCAGTTGGGGCAGGTGCCGGCGCTGGATCTGCACTTCGATCTGATGCCGGTGGACTTCCTCGCGCGATTCATCGCGTTTCACGCAGGTGGTTATGACCCTGCTCGGGCCGTATTCAACCTGCATAACCCGCAACCGTTGCGCTGGGAGCGCTACATCGCGTCGTTTCGAGAATGTGGCCGAGCGTTCGAGCTGGTCGGGGTCGAGCAGTGGCAGCGCCAGTTACAGGGTGTCGATCGGAGCAACGCGTTGTTCGAGGTCGTTGGCTTTTATCTGAGCGGCTTCGAAGAGGACATCGGCGACATCTCCCATATCGACCATGCCAACGCCAGTGACGGCGTGCAGCGCATGGGCGAACGCTATCCGGAAAAAGCCAGGCGCTGCTCGAGCGCGGCTGCCGGTATCTGCAGGACATACGGTTTATCTGATTCACCCCACCCCGTAAGGAGCAACATCATGCAAGCACTGAAACCCGACACACTGGTGCGCAATCCCGAAGGCTGTCTGGTGGTCTCGCAAGTCGATGTCGCCGCTGATGCACAAAGCGTGTGGAACATCGTTGGCAATTTCGCAGGCTTTGCGGTGTTCATTCCGGCGCTGAGTCATATCGAGATGACTGGCGATGGCGTACGCTCGATCCGCAAGAAGTTTTTCAAGGACAACAACTTTGTGATCGAGCAACTCAACTCACGCGATGAGCAAGCCATGAACATGACCTGGAGCTTGATCCATACCAGCCTGAATATCGGCAATCTTTGGGCTGCGATGGAGGTGAAAGACCTGGGTAACGGGCAGAGCCGCGCTATCTGGACGATCCAGGGGAGCCTTATGAAGGAGGTGCAGACGCGCTTCCGGGATTTCAGGCGTTCCTGCAAGGAATTTGCGGACGATGCGATGAGCAACGTGCGTAATCTGTGGAGCTAG

Transcript

HOLI00001.g52745.t1

Protein

Uniprot

Uniprot term	Description
Q70LM4	Linear gramicidin synthase subunit D OS=Brevibacillus parabrevis OX=54914 GN=lgrD PE=1 SV=1
Q75BB3	L-2-aminoadipate reductase large subunit OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=LYS2 PE=3 SV=2
P40976	L-2-aminoadipate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=lys1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07993	NAD_binding_4	Male sterility protein	Family	Interproscan
PF00550	PP-binding	Phosphopantetheine attachment site	Domain	Interproscan
PF10604	Polyketide_cyc2	Polyketide cyclase / dehydrase and lipid transport	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023393	Homologous_superfamily	START-like domain superfamily	Interproscan
IPR013120	Domain	Fatty acyl-coenzyme A reductase, NAD-binding domain	Interproscan
IPR009081	Domain	Phosphopantetheine binding ACP domain	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR019587	Family	Polyketide cyclase/dehydrase	Interproscan
IPR036736	Homologous_superfamily	ACP-like superfamily	Interproscan
IPR010080	Domain	Thioester reductase-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44845	CARRIER DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-