Gene detail

Detailed information of HOLI00001.G52911 in Hydra oligactis

Genomic Location: HOLI00001:4989391...4990944
NR annotation: SDQ26409.1, biotin carboxylase /acetyl-CoA carboxylase carboxyltransferase subunit alpha [Pseudomonas sp. UC 17F4]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
D3DJ42	2-oxoglutarate carboxylase small subunit OS=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) OX=608538 GN=cfiB PE=1 SV=1
P49787	Biotin carboxylase 1 OS=Bacillus subtilis (strain 168) OX=224308 GN=accC1 PE=3 SV=3
O27939	Pyruvate carboxylase subunit A OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=pycA PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00289	Biotin_carb_N	Biotin carboxylase, N-terminal domain	Domain	Interproscan
PF02786	CPSase_L_D2	Carbamoyl-phosphate synthase L chain, ATP binding domain	Domain	Interproscan
PF02785	Biotin_carb_C	Biotin carboxylase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005479	Domain	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	Interproscan
IPR011054	Homologous_superfamily	Rudiment single hybrid motif	Interproscan
IPR005481	Domain	Biotin carboxylase-like, N-terminal domain	Interproscan
IPR051602	Family	Acetyl-CoA Carboxylase Biotin Carboxylase Component	Interproscan
IPR016185	Homologous_superfamily	Pre-ATP-grasp domain superfamily	Interproscan
IPR011764	Domain	Biotin carboxylation domain	Interproscan
IPR005482	Domain	Biotin carboxylase, C-terminal	Interproscan
IPR011761	Domain	ATP-grasp fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48095	PYRUVATE CARBOXYLASE SUBUNIT A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01959	pycA; pyruvate carboxylase subunit A	EC:6.4.1.1	Carbon fixation pathways in prokaryotes	ko00720	deepkoala