Gene detail

Detailed information of HOLI00001.G52912 in Hydra oligactis

Genomic Location: HOLI00001:4990955...4992763
NR annotation: WP_042121614.1, sodium-extruding oxaloacetate decarboxylase subunit alpha [Pseudomonas japonica]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q58628	Pyruvate carboxylase subunit B OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=pycB PE=1 SV=1
Q8XGX8	Oxaloacetate decarboxylase alpha chain OS=Salmonella typhi OX=90370 GN=oadA1 PE=3 SV=3
Q03030	Oxaloacetate decarboxylase alpha chain OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=oadA1 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02436	PYC_OADA	Conserved carboxylase domain	Domain	Interproscan
PF00682	HMGL-like	HMGL-like	Domain	Interproscan
PF00364	Biotin_lipoyl	Biotin-requiring enzyme	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003379	Domain	Carboxylase, conserved domain	Interproscan
IPR050709	Family	Biotin Carboxyl Carrier/Decarboxylase Components	Interproscan
IPR000891	Domain	Pyruvate carboxyltransferase	Interproscan
IPR011053	Homologous_superfamily	Single hybrid motif	Interproscan
IPR000089	Domain	Biotin/lipoyl attachment	Interproscan
IPR005776	Family	Oxaloacetate decarboxylase, alpha subunit	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45266	OXALOACETATE DECARBOXYLASE ALPHA CHAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0006814	Biological Process	sodium ion transport	Interproscan
GO:0008948	Molecular Function	oxaloacetate decarboxylase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01960	pycB; pyruvate carboxylase subunit B	EC:6.4.1.1	Carbon fixation pathways in prokaryotes	ko00720	deepkoala