Genomic Location: HOLI00001:5072716...5074176
NR annotation: WP_262130650.1, MULTISPECIES: PLP-dependent aminotransferase family protein [unclassified Pseudomonas]
| CDS | ||||
| HOLI00001.g52982.t1 | ||||
| Transcript |
| HOLI00001.g52982.t1 |
| Protein |
| HOLI00001.G52982 |
| Uniprot term | Description |
|---|---|
| P39389 | Uncharacterized HTH-type transcriptional regulator YjiR OS=Escherichia coli (strain K12) OX=83333 GN=yjiR PE=3 SV=1 |
| P77730 | Uncharacterized HTH-type transcriptional regulator YdcR OS=Escherichia coli (strain K12) OX=83333 GN=ydcR PE=3 SV=1 |
| H3ZPL1 | Aromatic-amino-acid aminotransferase 1 OS=Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C) OX=523849 GN=OCC_04335 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00392 | GntR | Bacterial regulatory proteins, gntR family | Domain | Interproscan |
| PF00155 | Aminotran_1_2 | Aminotransferase class I and II | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000524 | Domain | Transcription regulator HTH, GntR | Interproscan |
| IPR015421 | Homologous_superfamily | Pyridoxal phosphate-dependent transferase, major domain | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| IPR015422 | Homologous_superfamily | Pyridoxal phosphate-dependent transferase, small domain | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR051446 | Family | HTH-type transcriptional regulator with aminotransferase domain | Interproscan |
| IPR015424 | Homologous_superfamily | Pyridoxal phosphate-dependent transferase | Interproscan |
| IPR004839 | Domain | Aminotransferase, class I/classII | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46577 | HTH-TYPE TRANSCRIPTIONAL REGULATORY PROTEIN GABR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0009058 | Biological Process | biosynthetic process | Interproscan |
| GO:0030170 | Molecular Function | pyridoxal phosphate binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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