Gene detail

Detailed information of HOLI00001.G53332 in Hydra oligactis

Genomic Location: HOLI00001:5485412...5485954
NR annotation: HCN44635.1, oligoribonuclease [Pseudomonas sp.]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q1I440	Oligoribonuclease OS=Pseudomonas entomophila (strain L48) OX=384676 GN=orn PE=3 SV=1
A5W9T8	Oligoribonuclease OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1) OX=351746 GN=orn PE=3 SV=1
Q3KIZ7	Oligoribonuclease OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=orn PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00929	RNase_T	Exonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022894	Family	Oligoribonuclease	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR013520	Domain	Exonuclease, RNase T/DNA polymerase III	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11046	OLIGORIBONUCLEASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13288	orn, REX2, REXO2; oligoribonuclease	EC:3.1.-.-	Ribosome biogenesis	ko03009	deepkoala