Detailed information of HOLI00001.G53506 in Hydra oligactis

Genomic Location: HOLI00001:5726852...5728168
NR annotation: RMR59533.1, Serine hydroxymethyltransferase [Pseudomonas cichorii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q88Q27Serine hydroxymethyltransferase 2 OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=glyA2 PE=3 SV=1
Q3K6J0Serine hydroxymethyltransferase 2 OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=glyA2 PE=3 SV=1
Q4K5R9Serine hydroxymethyltransferase 1 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=glyA1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00464SHMTSerine hydroxymethyltransferaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001085FamilySerine hydroxymethyltransferaseInterproscan
IPR039429DomainSerine hydroxymethyltransferase-like domainInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR049943FamilySerine hydroxymethyltransferase-likeInterproscan
IPR019798Binding_siteSerine hydroxymethyltransferase, pyridoxal phosphate binding siteInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11680SERINE HYDROXYMETHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004372Molecular Functionglycine hydroxymethyltransferase activityInterproscan
GO:0019264Biological Processglycine biosynthetic process from serineInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0035999Biological Processtetrahydrofolate interconversionInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006565Biological ProcessL-serine catabolic processInterproscan
GO:0006730Biological Processone-carbon metabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046653Biological Processtetrahydrofolate metabolic processInterproscan
GO:0046655Biological Processfolic acid metabolic processInterproscan
GO:0050897Molecular Functioncobalt ion bindingInterproscan
GO:0070905Molecular Functionserine bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00600glyA, SHMT; glycine hydroxymethyltransferaseEC:2.1.2.1
Antifolate resistanceko01523deepkoala

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