Gene detail

Detailed information of HOLI00001.G53524 in Hydra oligactis

Genomic Location: HOLI00001:5747460...5748683
NR annotation: WP_095158710.1, MULTISPECIES: Obg family GTPase CgtA [unclassified Pseudomonas]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
B1JF57	GTPase Obg OS=Pseudomonas putida (strain W619) OX=390235 GN=obg PE=3 SV=1
A5VYC6	GTPase Obg OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1) OX=351746 GN=obg PE=3 SV=1
Q88Q08	GTPase Obg OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=obg PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01926	MMR_HSR1	50S ribosome-binding GTPase	Family	Interproscan
PF01018	GTP1_OBG	GTP1/OBG	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014100	Family	GTP-binding protein Obg/CgtA	Interproscan
IPR006073	Domain	GTP binding domain	Interproscan
IPR006169	Domain	GTP1/OBG domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006074	Conserved_site	GTP1/OBG, conserved site	Interproscan
IPR031167	Domain	OBG-type guanine nucleotide-binding (G) domain	Interproscan
IPR036726	Homologous_superfamily	GTP1/OBG domain superfamily	Interproscan
IPR045086	Family	OBG-type GTPase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11702	DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000287	Molecular Function	magnesium ion binding	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03979	obgE, cgtA, MTG2; GTPase	EC:3.6.5.-	Ribosome biogenesis	ko03009	deepkoala