Gene detail

Detailed information of HOLI00001.G53555 in Hydra oligactis

Genomic Location: HOLI00001:5784510...5785874
NR annotation: WP_262155659.1, MULTISPECIES: diguanylate cyclase [unclassified Pseudomonas]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P54595	Uncharacterized protein YhcK OS=Bacillus subtilis (strain 168) OX=224308 GN=yhcK PE=4 SV=1
Q9A5I5	Response regulator PleD OS=Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) OX=190650 GN=pleD PE=1 SV=1
B8GZM2	Response regulator PleD OS=Caulobacter vibrioides (strain NA1000 / CB15N) OX=565050 GN=pleD PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08448	PAS_4	PAS fold	Domain	Interproscan
PF13426	PAS_9	PAS domain	Domain	Interproscan
PF00990	GGDEF	Diguanylate cyclase, GGDEF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000014	Domain	PAS domain	Interproscan
IPR013656	Domain	PAS fold-4	Interproscan
IPR035965	Homologous_superfamily	PAS domain superfamily	Interproscan
IPR000160	Domain	GGDEF domain	Interproscan
IPR029787	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR001610	Repeat	PAC motif	Interproscan
IPR050469	Family	Bacterial Diguanylate Cyclase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45138	REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0043709	Biological Process	cell adhesion involved in single-species biofilm formation	Interproscan
GO:0052621	Molecular Function	diguanylate cyclase activity	Interproscan
GO:1902201	Biological Process	negative regulation of bacterial-type flagellum-dependent cell motility	Interproscan