Gene detail

Detailed information of HOLI00001.G53749 in Hydra oligactis

Genomic Location: HOLI00001:6052196...6054405
NR annotation: WP_110968047.1, MULTISPECIES: Fe-S protein assembly chaperone HscA [Pseudomonas]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI00001.g53749.t1

ATGGCCCTACTGCAGATCGCCGAACCCGGTCAGACTCCTCAGCCCCACCAGCGCCGCCTGGCCGTGGGTATCGACCTTGGTACCACCAATTCGTTGGTCGCTGCATTGCGCAGTGGTCGCTCCGCCCCGTTGCCTGACGCCGAAGGCCGGGTCATCCTGCCGTCCGCGGTGCGCTACCACGCCGACCATGTCGACGTCGGTCACGCCGCCCGCGACTGCGCCTCCTCGGATCCCTTGAACACTGTCCTCTCGGTCAAGCGCCTGATGGGGCGTGGTCTGGCGGACGTGAAACAACTGGGTGAGCAACTGCCTTACCGCTTCGTCGGCGGTGAGTCGCACATGCCGTTCATCGAAACGGTGCAGGGCCCGAAGAGCCCGGTGGAAGTCTCCGCAGACATCCTCAAGGTGCTGCGTCAGCGCGCCGAAGAAACCCTGGGTGGCGAACTGGTCGGTGCGGTGATTACCGTTCCCGCCTATTTCGATGATGCCCAGCGCCAGGCCACCAAGGACGCTGCGCGTCTGGCCGGGCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCTGCCGTGGCCTATGGCCTGGACCAGAATGCCGAAGGCGTTGTGGCTATCTATGACCTCGGTGGCGGCACGTTCGATATTTCCATCCTGCGTCTGACCGGCGGTGTTTTCGAGGTATTGGCCACCGGCGGCGACAGCGCCCTGGGCGGTGATGACTTCGACCACGCCATCGCTAGCTGGATCGTGCAGGAAGCTGGTCTTTCCGCGGATCTCGATCCGGGTGCCCAGCGCCAGTTGCTGCAAACGGCCTGCGCGGCCAAGGAAGCCCTGACCGACGCCGAAGTGGTATCGGTAAGCCACGGCGAATGGCAGGCCGAGCTGACCCGCGCAGCCTTTGATGCGCTGATCGAGCCGATGGTCGCTCGCAGCCTGAAGGCTTGCCGCCGCGCTGTTCGCGACAGCGGCATCGAACTCGACGAAGTCGAAGCAGTGGTGATGGTTGGCGGCTCGACCCGCGTTCCGCGTGTGCGTGCAGCCGTAGGCGAATTGTTCGGTCGCACGCCGCTGACCGATATCGATCCGGATCAAGTGGTGGCCATCGGTGCCGCGATCCAGGCCGATACGCTGGCTGGCAATCGTCGCGAGGGTGGCGAGCTGTTGCTGCTCGACGTGATTCCGCTGTCCCTGGGGCTGGAGACCATGGGCGGGCTGATGGAGAAGGTGATTCCGCGCAACACCACCATTCCCGTTGCCCGTGCCCAGGAGTTCACCACCTACAAGGATGGCCAGAGCGCCATGATGATCCACGTGCTCCAGGGTGAGCGCGAATTGATCAGCGACTGCCGCTCCCTGGCGCGTTTCGAACTGCGTGGCATTCCGGCGATGGTCGCGGGCGCGGCGAAGATTCGCGTGACCTTCCAGGTCGATGCCGACGGCCTGCTCAGCGTTTCCGCACGGGAGCTGGGTTCGGGCGTCGAGTCGAGCATTCAGGTGAAACCGTCCTACGGTCTGACCGACGGCGAAATCGCCCGTATGCTCAAGGACTCCTTCGAGCATGCCGGCAACGACAAGGTCGCCCGTCAGTTGCGCGAGCATCAGGTCGATGCCGAGCGCCTGCTCGAAGCGGTGCAGGGTGCCCTGGATGCCGATGGCGAGCGCCTGCTGGACGTCGAAGAACGTCTGGCCATTGAACAACAGATGCAAGACTTGCGTGATTTGATGAGCGGCACCGATGGCCCGGCCATCGAGCAACAGACCCGGCGTCTGTCGCAGGTGACCGACGCCTTTGCCGCCCGGCGCCTTGATTCGACGTTCTGTCCGGACGGATTGGTCGTCGAAGACGTCAAGCCGGGCACGTCCATTCTCGAACTGGCCCATGACCACCACATCGAGATCGAAAGCGCCTGTGGCGGCGTGTGTGCCTGCACCACTTGCCACTGCATCGTTCGTGAAGGTTTCGACTCGGTCGAGGAAGCGGACGAGCTGGAAGAAGACATGCTGGACAAGGCCTGGGGCCTGGAAGCGCAGTCCCGCCTGGCCTGCCAGGTGGTCGTCGGTGATGAAGACCTCACCATCGAGATTCCGAAGTACTCGCTCAACCACGCCGCCGAAGCGCCGCACTGA

Transcript

HOLI00001.g53749.t1

Protein

Uniprot

Uniprot term	Description
Q88PK4	Chaperone protein HscA homolog OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=hscA PE=3 SV=1
Q1IEI8	Chaperone protein HscA homolog OS=Pseudomonas entomophila (strain L48) OX=384676 GN=hscA PE=3 SV=1
Q3K7A9	Chaperone protein HscA homolog OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=hscA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00111	Fer2	2Fe-2S iron-sulfur cluster binding domain	Domain	Interproscan
PF00012	HSP70	Hsp70 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011536	Family	Ferredoxin 2Fe-2S type, proteobacteria	Interproscan
IPR043129	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan
IPR042039	Domain	HscA chaperone, nucleotide-binding domain	Interproscan
IPR010236	Family	ISC system FeS cluster assembly, HscA chaperone	Interproscan
IPR018181	Conserved_site	Heat shock protein 70, conserved site	Interproscan
IPR013126	Family	Heat shock protein 70 family	Interproscan
IPR029048	Homologous_superfamily	Heat shock protein 70kD, C-terminal domain superfamily	Interproscan
IPR029047	Homologous_superfamily	Heat shock protein 70kD, peptide-binding domain superfamily	Interproscan
IPR001041	Domain	2Fe-2S ferredoxin-type iron-sulfur binding domain	Interproscan
IPR012675	Homologous_superfamily	Beta-grasp domain superfamily	Interproscan
IPR036010	Homologous_superfamily	2Fe-2S ferredoxin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19375	HEAT SHOCK PROTEIN 70KDA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009055	Molecular Function	electron transfer activity	Interproscan
GO:0051537	Molecular Function	2 iron, 2 sulfur cluster binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0016226	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0140662	Molecular Function	ATP-dependent protein folding chaperone	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan