Detailed information of HOLI00001.G53829 in Hydra oligactis

Genomic Location: HOLI00001:6154024...6156870
NR annotation: WP_262128684.1, valine--tRNA ligase [Pseudomonas sp. 5P_5.1_Bac1]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q88P76Valine--tRNA ligase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=valS PE=3 SV=1
Q4ZXI0Valine--tRNA ligase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=valS PE=3 SV=1
Q4KHT9Valine--tRNA ligase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=valS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10458Val_tRNA-synt_CValyl tRNA synthetase tRNA binding armDomainInterproscan
PF08264Anticodon_1Anticodon-binding domain of tRNA ligaseDomainInterproscan
PF00133tRNA-synt_1tRNA synthetases class I (I, L, M and V)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037118Homologous_superfamilyValyl-tRNA synthetase, tRNA-binding arm superfamilyInterproscan
IPR002303FamilyValine-tRNA ligaseInterproscan
IPR019499DomainValyl-tRNA synthetase, tRNA-binding armInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR013155DomainMethionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingInterproscan
IPR009008Homologous_superfamilyValyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainInterproscan
IPR033705DomainValyl tRNA synthetase, anticodon-binding domainInterproscan
IPR002300DomainAminoacyl-tRNA synthetase, class IaInterproscan
IPR010978Homologous_superfamilyClass I and II aminoacyl-tRNA synthetase, tRNA-binding armInterproscan
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11946VALYL-TRNA SYNTHETASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004832Molecular Functionvaline-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006438Biological Processvalyl-tRNA aminoacylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01873VARS, valS; valyl-tRNA synthetaseEC:6.1.1.9
Transfer RNA biogenesisko03016deepkoala

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