Genomic Location: HOLI00001:6249714...6250560
NR annotation: WP_095154216.1, response regulator transcription factor [Pseudomonas sp. Irchel 3E13]
| CDS | |||||
| HOLI00001.g53897.t1 | |||||
| Transcript |
| HOLI00001.g53897.t1 |
| Protein |
| HOLI00001.G53897 |
| Uniprot term | Description |
|---|---|
| Q04803 | Transcriptional activator protein PfeR OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=pfeR PE=3 SV=1 |
| P69229 | Transcriptional regulatory protein BaeR OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=baeR PE=1 SV=1 |
| P69228 | Transcriptional regulatory protein BaeR OS=Escherichia coli (strain K12) OX=83333 GN=baeR PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00486 | Trans_reg_C | Transcriptional regulatory protein, C terminal | Domain | Interproscan |
| PF00072 | Response_reg | Response regulator receiver domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001789 | Domain | Signal transduction response regulator, receiver domain | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR001867 | Domain | OmpR/PhoB-type DNA-binding domain | Interproscan |
| IPR039420 | Family | Transcriptional regulatory protein WalR-like | Interproscan |
| IPR011006 | Homologous_superfamily | CheY-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48111 | REGULATOR OF RPOS | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000160 | Biological Process | phosphorelay signal transduction system | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0000156 | Molecular Function | phosphorelay response regulator activity | Interproscan |
| GO:0000976 | Molecular Function | transcription cis-regulatory region binding | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0032993 | Cellular Component | protein-DNA complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K19610 | pfeR, pirR; two-component system, OmpR family, response regulator PfeR | - | Two-component system | ko02022 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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