Detailed information of HOLI00002.G17407 in Hydra oligactis

Genomic Location: HOLI00002:100045...102128
NR annotation: MBK6985540.1, lysine--tRNA ligase [Bacteroidota bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7MUV7Lysine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) OX=242619 GN=lysS PE=3 SV=1
B2RJY1Lysine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561) OX=431947 GN=lysS PE=3 SV=1
Q8A5W4Lysine--tRNA ligase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=lysS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01336tRNA_anti-codonOB-fold nucleic acid binding domainDomainInterproscan
PF00152tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR044136DomainLysine-tRNA ligase, class II, N-terminalInterproscan
IPR004365DomainOB-fold nucleic acid binding domain, AA-tRNA synthetase-typeInterproscan
IPR004364DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR002313FamilyLysine-tRNA ligase, class IIInterproscan
IPR018149DomainLysyl-tRNA synthetase, class II, C-terminalInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42918LYSYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004824Molecular Functionlysine-tRNA ligase activityInterproscan
GO:0006430Biological Processlysyl-tRNA aminoacylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

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