Gene detail

Detailed information of HOLI00002.G17544 in Hydra oligactis

Genomic Location: HOLI00002:297308...298387
NR annotation: MCD6017527.1, gcvT [Bacteroidota bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A6GXW3	Aminomethyltransferase OS=Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86) OX=402612 GN=gcvT PE=3 SV=1
A6L8T3	Aminomethyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=gcvT PE=3 SV=1
Q5LFT6	Aminomethyltransferase OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / LMG 10263 / NCTC 9343 / Onslow / VPI 2553 / EN-2) OX=272559 GN=gcvT PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08669	GCV_T_C	Glycine cleavage T-protein C-terminal barrel domain	Domain	Interproscan
PF01571	GCV_T	Aminomethyltransferase folate-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006223	Family	Glycine cleavage system T protein	Interproscan
IPR029043	Homologous_superfamily	Glycine cleavage T-protein/YgfZ, C-terminal	Interproscan
IPR027266	Homologous_superfamily	GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1	Interproscan
IPR013977	Domain	Glycine cleavage T-protein, C-terminal barrel domain	Interproscan
IPR022903	Family	Glycine cleavage system T protein, bacteria	Interproscan
IPR028896	Family	Aminomethyltransferase-like	Interproscan
IPR006222	Domain	Aminomethyltransferase, folate-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43757	AMINOMETHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004047	Molecular Function	aminomethyltransferase activity	Interproscan
GO:0006546	Biological Process	glycine catabolic process	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00605	gcvT, AMT; glycine cleavage system T protein (aminomethyltransferase)	EC:2.1.2.10	One carbon pool by folate	ko00670	deepkoala