Gene detail

Detailed information of HOLI00002.G17735 in Hydra oligactis

Genomic Location: HOLI00002:513719...514318
NR annotation: MBL7935551.1, serine hydroxymethyltransferase [Bacteroidia bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q11NZ7	Serine hydroxymethyltransferase OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=glyA PE=3 SV=1
A6GXG2	Serine hydroxymethyltransferase OS=Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86) OX=402612 GN=glyA PE=3 SV=1
A5FEF4	Serine hydroxymethyltransferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=glyA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00464	SHMT	Serine hydroxymethyltransferase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR049943	Family	Serine hydroxymethyltransferase-like	Interproscan
IPR039429	Domain	Serine hydroxymethyltransferase-like domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11680	SERINE HYDROXYMETHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004372	Molecular Function	glycine hydroxymethyltransferase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006565	Biological Process	L-serine catabolic process	Interproscan
GO:0006730	Biological Process	one-carbon metabolic process	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0019264	Biological Process	glycine biosynthetic process from serine	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0046653	Biological Process	tetrahydrofolate metabolic process	Interproscan
GO:0046655	Biological Process	folic acid metabolic process	Interproscan
GO:0050897	Molecular Function	cobalt ion binding	Interproscan
GO:0070905	Molecular Function	serine binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00600	glyA, SHMT; glycine hydroxymethyltransferase	EC:2.1.2.1	Antifolate resistance	ko01523	deepkoala