Gene detail

Detailed information of HOLI00002.G18409 in Hydra oligactis

Genomic Location: HOLI00002:1297109...1297764
NR annotation: MBI3518869.1, 50S ribosomal protein L13 [Bacteroidota bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A6L0V0	Small ribosomal subunit protein uS9 OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=rpsI PE=3 SV=1
C4KZL3	Large ribosomal subunit protein uL13 OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) OX=360911 GN=rplM PE=3 SV=1
Q5L8W6	Small ribosomal subunit protein uS9 OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / LMG 10263 / NCTC 9343 / Onslow / VPI 2553 / EN-2) OX=272559 GN=rpsI PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00572	Ribosomal_L13	Ribosomal protein L13	Family	Interproscan
PF00380	Ribosomal_S9	Ribosomal protein S9/S16	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005822	Family	Large ribosomal subunit protein uL13	Interproscan
IPR036899	Homologous_superfamily	Large ribosomal subunit protein uL13 superfamily	Interproscan
IPR000754	Family	Small ribosomal subunit protein uS9	Interproscan
IPR005823	Family	Large ribosomal subunit protein uL13, bacterial-type	Interproscan
IPR020574	Conserved_site	Small ribosomal subunit protein uS9, conserved site	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR014721	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21569	RIBOSOMAL PROTEIN S9	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0015935	Cellular Component	small ribosomal subunit	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02996	RP-S9, MRPS9, rpsI; small subunit ribosomal protein S9	-	Ribosome	ko03011	deepkoala