Gene detail

Detailed information of HOLI00002.G18530 in Hydra oligactis

Genomic Location: HOLI00002:1443327...1443808
NR annotation: MBI3519398.1, cold shock domain-containing protein [Bacteroidota bacterium]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P96349	Cold shock protein 2 OS=Lactiplantibacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) OX=220668 GN=cspL PE=2 SV=1
P0C0F1	Major cold shock protein OS=Streptococcus pyogenes serotype M1 OX=301447 GN=cspA PE=3 SV=1
P0DA48	Major cold shock protein OS=Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315) OX=198466 GN=cspA PE=3 SV=1

Gene family	Subfamily
Transcription Factors Family	CSD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00313	CSD	'Cold-shock' DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050181	Family	Cold shock domain-containing protein	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR019844	Domain	Cold-shock (CSD) domain	Interproscan
IPR002059	Domain	Cold-shock protein, DNA-binding	Interproscan
IPR011129	Domain	Cold shock domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11544	COLD SHOCK DOMAIN CONTAINING PROTEINS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0010468	Biological Process	regulation of gene expression	Interproscan