Detailed information of HOLI00002.G18788 in Hydra oligactis

Genomic Location: HOLI00002:1767231...1769842
NR annotation: MBI3520840.1, threonine--tRNA ligase [Bacteroidota bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q11UK3Threonine--tRNA ligase OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=thrS PE=3 SV=1
B2RJD6Threonine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561) OX=431947 GN=thrS PE=3 SV=1
A6L9S2Threonine--tRNA ligase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=thrS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan
PF00707IF3_CTranslation initiation factor IF-3, C-terminal domainDomainInterproscan
PF02824TGSTGS domainDomainInterproscan
PF07973tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF05198IF3_NTranslation initiation factor IF-3, N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019813Conserved_siteTranslation initiation factor 3, conserved siteInterproscan
IPR018163Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR012947DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR002320FamilyThreonine-tRNA ligase, class IIaInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR004095DomainTGSInterproscan
IPR001288FamilyTranslation initiation factor 3Interproscan
IPR036787Homologous_superfamilyTranslation initiation factor 3 (IF-3), N-terminal domain superfamilyInterproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR012676Homologous_superfamilyTGS-likeInterproscan
IPR033728DomainThreonine-tRNA ligase catalytic core domainInterproscan
IPR019815DomainTranslation initiation factor 3, C-terminalInterproscan
IPR012675Homologous_superfamilyBeta-grasp domain superfamilyInterproscan
IPR036788Homologous_superfamilyTranslation initiation factor 3 (IF-3), C-terminal domain superfamilyInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR019814DomainTranslation initiation factor 3, N-terminalInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11451THREONINE-TRNA LIGASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0004829Molecular Functionthreonine-tRNA ligase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006435Biological Processthreonyl-tRNA aminoacylationInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01868TARS, thrS; threonyl-tRNA synthetaseEC:6.1.1.3
Transfer RNA biogenesisko03016deepkoala

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