Genomic Location: HOLI00002:2974092...2976600
NR annotation: MBI3518765.1, single-stranded-DNA-specific exonuclease RecJ [Bacteroidota bacterium]
| CDS | ||||
| HOLI00002.g19775.t1 | ||||
| Transcript |
| HOLI00002.g19775.t1 |
| Protein |
| HOLI00002.G19775 |
| Uniprot term | Description |
|---|---|
| O32044 | Single-stranded-DNA-specific exonuclease RecJ OS=Bacillus subtilis (strain 168) OX=224308 GN=recJ PE=1 SV=1 |
| Q11PB4 | Probable transcriptional regulatory protein CHU_3516 OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=CHU_3516 PE=3 SV=1 |
| A6GXW2 | Probable transcriptional regulatory protein FP0835 OS=Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86) OX=402612 GN=FP0835 PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF17768 | RecJ_OB | RecJ OB domain | Domain | Interproscan |
| PF01368 | DHH | DHH family | Family | Interproscan |
| PF01709 | Transcrip_reg | TACO1/YebC second and third domain | Family | Interproscan |
| PF02272 | DHHA1 | DHHA1 domain | Family | Interproscan |
| PF20772 | TACO1_YebC_N | TACO1/YebC protein N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002876 | Family | Transcriptional regulator TACO1-like | Interproscan |
| IPR038763 | Homologous_superfamily | DHH phosphoesterase superfamily | Interproscan |
| IPR041122 | Domain | RecJ, OB domain | Interproscan |
| IPR029072 | Homologous_superfamily | YebC-like | Interproscan |
| IPR001667 | Domain | DDH domain | Interproscan |
| IPR048300 | Domain | TACO1/YebC-like, second and third domains | Interproscan |
| IPR003156 | Domain | DHHA1 domain | Interproscan |
| IPR026564 | Homologous_superfamily | Transcriptional regulator TACO1-like, domain 3 | Interproscan |
| IPR017856 | Homologous_superfamily | Integrase-like, N-terminal | Interproscan |
| IPR049083 | Domain | TACO1/YebC-like, N-terminal domain | Interproscan |
| IPR051673 | Family | Single-stranded-DNA-specific exonuclease RecJ | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR30255 | SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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