Detailed information of HOLI00002.G19891 in Hydra oligactis

Genomic Location: HOLI00002:3103627...3106295
NR annotation: MCD6019379.1, alanine--tRNA ligase [Bacteroidota bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q11V49Alanine--tRNA ligase OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=alaS PE=3 SV=1
A5FIP9Alanine--tRNA ligase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=alaS PE=3 SV=1
A0LXX3Alanine--tRNA ligase OS=Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803) OX=411154 GN=alaS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07973tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan
PF02272DHHA1DHHA1 domainFamilyInterproscan
PF01411tRNA-synt_2ctRNA synthetases class II (A)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018163Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR012947DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR002318FamilyAlanine-tRNA ligase, class IIcInterproscan
IPR023033FamilyAlanine-tRNA ligase, eukaryota/bacteriaInterproscan
IPR003156DomainDHHA1 domainInterproscan
IPR018165DomainAlanyl-tRNA synthetase, class IIc, core domainInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR018164DomainAlanyl-tRNA synthetase, class IIc, N-terminalInterproscan
IPR050058FamilyAlanine--tRNA ligaseInterproscan
IPR018162Homologous_superfamilyAlanine-tRNA ligase, class IIc, anti-codon-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11777ALANYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0004813Molecular Functionalanine-tRNA ligase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006419Biological Processalanyl-tRNA aminoacylationInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01872AARS, alaS; alanyl-tRNA synthetaseEC:6.1.1.7
Transfer RNA biogenesisko03016deepkoala

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