Gene detail

Detailed information of HOLI00002.G19975 in Hydra oligactis

Genomic Location: HOLI00002:3207880...3208185
NR annotation: MBP6755885.1, 30S ribosomal protein S10 [Bacteroidia bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A0M599	Small ribosomal subunit protein uS10 OS=Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803) OX=411154 GN=rpsJ PE=3 SV=1
A5FMY2	Small ribosomal subunit protein uS10 OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=rpsJ PE=3 SV=1
A6GZA0	Small ribosomal subunit protein uS10 OS=Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86) OX=402612 GN=rpsJ PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00338	Ribosomal_S10	Ribosomal protein S10p/S20e	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036838	Homologous_superfamily	Small ribosomal subunit protein uS10 domain superfamily	Interproscan
IPR027486	Domain	Small ribosomal subunit protein uS10 domain	Interproscan
IPR018268	Conserved_site	Small ribosomal subunit protein uS10, conserved site	Interproscan
IPR001848	Family	Small ribosomal subunit protein uS10	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11700	30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0015935	Cellular Component	small ribosomal subunit	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02946	RP-S10, MRPS10, rpsJ; small subunit ribosomal protein S10	-	Ribosome	ko03011	deepkoala