Detailed information of HOLI00002.G20591 in Hydra oligactis

Genomic Location: HOLI00002:3969355...3972228
NR annotation: MBA3680583.1, aminomethyl-transferring glycine dehydrogenase [Bacteroidota bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A5FMT0Glycine dehydrogenase (decarboxylating) OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=gcvP PE=3 SV=1
A0M5D4Glycine dehydrogenase (decarboxylating) OS=Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803) OX=411154 GN=gcvP PE=3 SV=1
B2J427Glycine dehydrogenase (decarboxylating) OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=gcvP PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02347GDC-PGlycine cleavage system P-proteinDomainInterproscan
PF21478GcvP2_CGlycine dehydrogenase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049315DomainGlycine cleavage system P-protein, N-terminal domainInterproscan
IPR020581FamilyGlycine cleavage system P proteinInterproscan
IPR049316DomainGlycine dehydrogenase, C-terminal domainInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR003437FamilyGlycine dehydrogenase (decarboxylating)Interproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11773GLYCINE DEHYDROGENASE, DECARBOXYLATINGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004375Molecular Functionglycine dehydrogenase (decarboxylating) activityInterproscan
GO:0006546Biological Processglycine catabolic processInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005960Cellular Componentglycine cleavage complexInterproscan
GO:0016594Molecular Functionglycine bindingInterproscan
GO:0019464Biological Processglycine decarboxylation via glycine cleavage systemInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0006544Biological Processglycine metabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00281GLDC, gcvP; glycine cleavage system P protein (glycine dehydrogenase)EC:1.4.4.2
Lipoic acid metabolismko00785deepkoala

TOP