Gene detail

Detailed information of HOLI00002.G20864 in Hydra oligactis

Genomic Location: HOLI00002:4306254...4307374
NR annotation: MCD6019901.1, DNA-binding response regulator [Bacteroidota bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9AE24	Transcriptional regulatory protein RprY OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=rprY PE=3 SV=2
P94413	Uncharacterized transcriptional regulatory protein YclJ OS=Bacillus subtilis (strain 168) OX=224308 GN=yclJ PE=3 SV=1
Q2FY79	Transcriptional regulatory protein SrrA OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=srrA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00486	Trans_reg_C	Transcriptional regulatory protein, C terminal	Domain	Interproscan
PF00072	Response_reg	Response regulator receiver domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039420	Family	Transcriptional regulatory protein WalR-like	Interproscan
IPR016032	Homologous_superfamily	Signal transduction response regulator, C-terminal effector	Interproscan
IPR001867	Domain	OmpR/PhoB-type DNA-binding domain	Interproscan
IPR001789	Domain	Signal transduction response regulator, receiver domain	Interproscan
IPR035911	Homologous_superfamily	MurE/MurF, N-terminal	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR011006	Homologous_superfamily	CheY-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48111	REGULATOR OF RPOS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000156	Molecular Function	phosphorelay response regulator activity	Interproscan
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0032993	Cellular Component	protein-DNA complex	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000160	Biological Process	phosphorelay signal transduction system	Interproscan