Detailed information of HOLI00002.G21025 in Hydra oligactis

Genomic Location: HOLI00002:4496752...4498794
NR annotation: MCD6018468.1, methionine--tRNA ligase [Bacteroidota bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A5FLM7Methionine--tRNA ligase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=metG PE=3 SV=1
A6GVQ2Methionine--tRNA ligase OS=Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86) OX=402612 GN=metG PE=3 SV=1
Q11RM3Methionine--tRNA ligase OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=metG PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09334tRNA-synt_1gtRNA synthetases class I (M)FamilyInterproscan
PF19303Anticodon_3Anticodon binding domain of methionyl tRNA ligaseDomainInterproscan
PF01588tRNA_bindPutative tRNA binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004495DomainMethionyl-tRNA synthetase, beta subunit, C-terminalInterproscan
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR014758FamilyMethionyl-tRNA synthetaseInterproscan
IPR033911DomainMethioninyl-tRNA synthetase core domainInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR029038Homologous_superfamilyMethionyl-tRNA synthetase, Zn-domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR015413DomainMethionyl/Leucyl tRNA synthetaseInterproscan
IPR023458FamilyMethionine-tRNA ligase, type 1Interproscan
IPR041872DomainMethionyl-tRNA synthetase, anticodon-binding domainInterproscan
IPR002547DomaintRNA-binding domainInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45765METHIONINE--TRNA LIGASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004825Molecular Functionmethionine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006431Biological Processmethionyl-tRNA aminoacylationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01874MARS, metG; methionyl-tRNA synthetaseEC:6.1.1.10
Transfer RNA biogenesisko03016deepkoala

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