Genomic Location: HOLI00002:5397558...5398880
NR annotation: MBK8368799.1, deoxyribodipyrimidine photo-lyase [Bacteroidota bacterium]
| CDS | |||||
| HOLI00002.g21814.t1 | |||||
| Transcript |
| HOLI00002.g21814.t1 |
| Protein |
| HOLI00002.G21814 |
| Uniprot term | Description |
|---|---|
| Q55081 | Deoxyribodipyrimidine photo-lyase OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) OX=1111708 GN=phrA PE=1 SV=1 |
| Q9HQ46 | Deoxyribodipyrimidine photo-lyase OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) OX=64091 GN=phr PE=3 SV=2 |
| Q9KNA8 | Deoxyribodipyrimidine photo-lyase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=phrA PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00875 | DNA_photolyase | DNA photolyase | Domain | Interproscan |
| PF03441 | FAD_binding_7 | FAD binding domain of DNA photolyase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR018394 | Conserved_site | Cryptochrome/DNA photolyase class 1, conserved site, C-terminal | Interproscan |
| IPR014729 | Homologous_superfamily | Rossmann-like alpha/beta/alpha sandwich fold | Interproscan |
| IPR006050 | Domain | DNA photolyase, N-terminal | Interproscan |
| IPR036155 | Homologous_superfamily | Cryptochrome/photolyase, N-terminal domain superfamily | Interproscan |
| IPR005101 | Domain | Cryptochrome/DNA photolyase, FAD-binding domain | Interproscan |
| IPR002081 | Family | Cryptochrome/DNA photolyase class 1 | Interproscan |
| IPR036134 | Homologous_superfamily | Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11455 | CRYPTOCHROME | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003904 | Molecular Function | deoxyribodipyrimidine photo-lyase activity | Interproscan |
| GO:0009416 | Biological Process | response to light stimulus | Interproscan |
| GO:0071949 | Molecular Function | FAD binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K01669 | phr, PHR1; deoxyribodipyrimidine photo-lyase | EC:4.1.99.3 | DNA repair and recombination proteins | ko03400 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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