Detailed information of HOLI00003.G5351 in Hydra oligactis

Genomic Location: HOLI00003:1385733...1470884
NR annotation: XP_047141686.1, replication protein A 70 kDa DNA-binding subunit [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8VEE4Replication protein A 70 kDa DNA-binding subunit OS=Mus musculus OX=10090 GN=Rpa1 PE=1 SV=1
Q01588Replication protein A 70 kDa DNA-binding subunit OS=Xenopus laevis OX=8355 GN=rpa1 PE=1 SV=1
Q5R7Q4Replication protein A 70 kDa DNA-binding subunit OS=Pongo abelii OX=9601 GN=RPA1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16900REPA_OB_2Replication protein A OB domainDomainInterproscan
PF00531DeathDeath domainDomainInterproscan
PF08646Rep_fac-A_CReplication factor-A C terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031657DomainReplication protein A, OB domainInterproscan
IPR047192DomainReplication factor A, C-terminal, eukaryotesInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR004591FamilyReplication factor A protein 1Interproscan
IPR000488DomainDeath domainInterproscan
IPR013955DomainReplication factor A, C-terminalInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23273REPLICATION FACTOR A 1, RFA1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005662Cellular ComponentDNA replication factor A complexInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0007004Biological Processtelomere maintenance via telomeraseInterproscan
GO:0043047Molecular Functionsingle-stranded telomeric DNA bindingInterproscan
GO:0051321Biological Processmeiotic cell cycleInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

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