Gene detail

Detailed information of HOLI00009.G37388 in Hydra oligactis

Genomic Location: HOLI00009:953556...961281
NR annotation: NP_001296580.1, DNA repair protein complementing XP-A cells homolog [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P27088	DNA repair protein complementing XP-A cells homolog OS=Xenopus laevis OX=8355 GN=xpa PE=2 SV=1
Q64267	DNA repair protein complementing XP-A cells homolog OS=Mus musculus OX=10090 GN=Xpa PE=1 SV=2
P27089	DNA repair protein complementing XP-A cells homolog OS=Gallus gallus OX=9031 GN=XPA PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05181	XPA_C	XPA protein C-terminus	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009061	Homologous_superfamily	Putative DNA-binding domain superfamily	Interproscan
IPR022656	Domain	XPA, C-terminal	Interproscan
IPR000465	Family	XPA/RAD14	Interproscan
IPR037129	Homologous_superfamily	XPA domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10142	DNA REPAIR PROTEIN COMPLEMENTING XP-A CELLS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003684	Molecular Function	damaged DNA binding	Interproscan
GO:0006289	Biological Process	nucleotide-excision repair	Interproscan
GO:0000110	Cellular Component	nucleotide-excision repair factor 1 complex	Interproscan
GO:0000715	Biological Process	nucleotide-excision repair, DNA damage recognition	Interproscan
GO:0006284	Biological Process	base-excision repair	Interproscan
GO:0033683	Biological Process	obsolete nucleotide-excision repair, DNA incision	Interproscan
GO:0070914	Biological Process	UV-damage excision repair	Interproscan
GO:1901255	Biological Process	nucleotide-excision repair involved in interstrand cross-link repair	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10847	XPA; DNA-repair protein complementing XP-A cells	-	DNA repair and recombination proteins	ko03400	deepkoala