Detailed information of HOLI00014.G10323 in Hydra oligactis

Genomic Location: HOLI00014:1237032...1237730
NR annotation: WP_105262036.1, response regulator transcription factor [Rhodoferax sp. TS-BS-61-7]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8XBS3Transcriptional regulatory protein QseB OS=Escherichia coli O157:H7 OX=83334 GN=qseB PE=2 SV=1
P52076Transcriptional regulatory protein QseB OS=Escherichia coli (strain K12) OX=83333 GN=qseB PE=2 SV=1
Q9HV32Response regulator protein PmrA OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=pmrA PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00072Response_regResponse regulator receiver domainDomainInterproscan
PF00486Trans_reg_CTranscriptional regulatory protein, C terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001867DomainOmpR/PhoB-type DNA-binding domainInterproscan
IPR016032Homologous_superfamilySignal transduction response regulator, C-terminal effectorInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR039420FamilyTranscriptional regulatory protein WalR-likeInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48111REGULATOR OF RPOSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000156Molecular Functionphosphorelay response regulator activityInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0032993Cellular Componentprotein-DNA complexInterproscan

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