Gene detail

Detailed information of HOLI00014.G10426 in Hydra oligactis

Genomic Location: HOLI00014:1363178...1364269
NR annotation: WP_105262137.1, redox-regulated ATPase YchF [Rhodoferax sp. TS-BS-61-7]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P0ABU3	Ribosome-binding ATPase YchF OS=Escherichia coli O157:H7 OX=83334 GN=ychF PE=3 SV=2
P0ABU2	Ribosome-binding ATPase YchF OS=Escherichia coli (strain K12) OX=83333 GN=ychF PE=1 SV=2
P0ABU4	Ribosome-binding ATPase YchF OS=Shigella flexneri OX=623 GN=ychF PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01926	MMR_HSR1	50S ribosome-binding GTPase	Family	Interproscan
PF06071	YchF-GTPase_C	Protein of unknown function (DUF933)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004396	Family	Ribosome-binding ATPase YchF/Obg-like ATPase 1	Interproscan
IPR012676	Homologous_superfamily	TGS-like	Interproscan
IPR041706	Domain	YchF, N-terminal	Interproscan
IPR006073	Domain	GTP binding domain	Interproscan
IPR012675	Homologous_superfamily	Beta-grasp domain superfamily	Interproscan
IPR013029	Domain	YchF, C-terminal domain	Interproscan
IPR031167	Domain	OBG-type guanine nucleotide-binding (G) domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR023192	Homologous_superfamily	TGS-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23305	OBG GTPASE FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06942	ychF; ribosome-binding ATPase	-	Ribosome biogenesis	ko03009	deepkoala