Gene detail

Detailed information of HOLI00014.G10429 in Hydra oligactis

Genomic Location: HOLI00014:1365805...1366779
NR annotation: WP_105262139.1, tRNA dihydrouridine synthase DusB [Rhodoferax sp. TS-BS-61-7]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8PP72	tRNA-dihydrouridine synthase B OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=dusB PE=3 SV=1
Q9HUW1	tRNA-dihydrouridine synthase B OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=dusB PE=3 SV=1
Q88DK5	tRNA-dihydrouridine synthase B OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=dusB PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01207	Dus	Dihydrouridine synthase (Dus)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018517	Conserved_site	tRNA-dihydrouridine synthase, conserved site	Interproscan
IPR032887	Family	tRNA-dihydrouridine synthase B	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR001269	Family	tRNA-dihydrouridine synthase	Interproscan
IPR024036	Homologous_superfamily	tRNA-dihydrouridine synthase, putative, C-terminal	Interproscan
IPR004652	Family	tRNA-dihydrouridine synthase DusB-like	Interproscan
IPR035587	Domain	DUS-like, FMN-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45846	TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008033	Biological Process	tRNA processing	Interproscan
GO:0017150	Molecular Function	tRNA dihydrouridine synthase activity	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0002943	Biological Process	tRNA dihydrouridine synthesis	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05540	dusB; tRNA-dihydrouridine synthase B	EC:1.-.-.-	Transfer RNA biogenesis	ko03016	deepkoala